PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090025.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HRT-like
Protein Properties Length: 525aa    MW: 58858.4 Da    PI: 10.085
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090025.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like50.53.4e-16320350131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCG+ l+  s+C+r+Pv+gRKRC+eHKGmRi
  XP_010090025.1 320 ICGMVLGLDSICRRPPVEGRKRCAEHKGMRI 350
                     8*****************************7 PP

2HRT-like52.49.1e-17397427131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCG+il dGs+C  qP kg+KRC eHKG++i
  XP_010090025.1 397 ICGFILADGSPCISQPLKGNKRCLEHKGRKI 427
                     8***************************997 PP

3HRT-like535.8e-17478508131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCGv l+dG vC+r+Pv gR RCeeHKG R+
  XP_010090025.1 478 ICGVVLGDGLVCTRKPVVGRVRCEEHKGIRV 508
                     8***************************997 PP

Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MRERERERST DFWLLTPASQ FRQFTSSYEG KRTKGVFKVR VTVIFLGRSR DIVAGDPVAV  60
MSRLKREDCK RTKHDREFSK WEILIGPSDW EEYLLGKEGA ERYRVHNLPK NSGPGVYELG  120
IAVSRTGLGR EIGKLDPERI VVVYLGQADN VRTRLQHYGR TGAHLGNSCP PQCKTVIPQK  180
GPGLFEEILS RGYPIIFRWA PMQSKSDALK TETELLNTFD YAWNTSINGT RRPDDILNKL  240
KKISSSNIHF SDIARKLVPF SQKQVGIRIK ARKFPSAEEK IDTSADEESQ NIFSRVFKFG  300
RSQPKLVLDR SVIVLEDTTI CGMVLGLDSI CRRPPVEGRK RCAEHKGMRI KGPVSVALSN  360
SNVNSQSTFS APSSSLHSEE LQPVTFNNAS RESFTPICGF ILADGSPCIS QPLKGNKRCL  420
EHKGRKILQQ TNSASVTKEK LYYLPDPVSE SKSSEICFSG EVQAQAFAKR LNANCDTICG  480
VVLGDGLVCT RKPVVGRVRC EEHKGIRVTR FATTKFAAEK QIQVV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090025.10.0hypothetical protein L484_027255
TrEMBLW9R5X10.0W9R5X1_9R
STRINGVIT_11s0016g02440.t011e-147(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF94093139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.11e-102effector of transcription2